A table of plant-based dishes: lentil soup, a tofu and chickpea bowl, avocado and hummus toast, and a smoothie bowl

Your DNA and the gut-brain axis: how your gut and your mind keep talking

By Andre Ling, Co-Founder, MyDNA

You have probably felt it. Nerves before a big meeting turn into a churning stomach. A bad night’s sleep leaves your appetite off. A heavy meal leaves you flat and foggy.

That is the gut-brain axis at work: a two-way line of communication between your digestive system and your brain. It is one of the most active areas of health research, and also one of the most overhyped. This guide gives you the full picture, including what is well supported, what is still uncertain, and where your DNA fits in.

What is the gut-brain axis?

The gut and the brain are in constant conversation. The brain influences how your gut moves, secretes and feels. The gut sends signals back that can reach the brain. Researchers describe five main channels.

Diagram of five two-way channels between gut and brain: nerves, immune system, stress hormones, microbial chemicals, messengers
ChannelWhat it does
NervesThe vagus nerve links the gut and brain directly. The gut also has its own network of nerves, the enteric nervous system, which runs much of digestion locally.
Immune systemMost of the body’s immune activity is concentrated around the gut lining, and immune signals travel to the brain.
Stress hormonesStress switches on the body’s stress system, which releases cortisol. That can change gut movement and sensitivity, and gut signals can feed back into the stress response.
Microbial chemicalsTrillions of gut bacteria ferment dietary fibre into short-chain fatty acids and other compounds that influence the gut lining, the immune system and nerve signalling.
Gut-made messengersCells in the gut lining make serotonin and other signalling chemicals that act on gut nerves.

These channels are well described in research, much of it in animals. How much each one matters for a particular person’s mood, sleep or digestion is less settled.

Two common myths

“The gut is a second brain.” The enteric nervous system is real and substantial. It is often estimated to hold hundreds of millions of nerve cells, and it can coordinate digestion on its own. But “second brain” is a metaphor. It does not decide your mood independently.

“90% of your serotonin is made in the gut.” This figure refers to the body’s total serotonin, most of which is produced by cells in the gut lining. It does not mean the gut makes 90% of the serotonin in your brain. Serotonin made in the gut does not cross into the brain, which makes its own from the amino acid tryptophan.

Keep both in mind when you see a product promising a quick “gut cleanse” that fixes your mood. The research does not support that kind of claim.

Why a healthy gut-brain axis matters

A woman relaxes on a sofa with a cup of tea, looking out of a window over city apartments

The axis touches things people care about every day. It shapes how comfortably you digest food and how well you absorb what it contains. The gut is also a major meeting point between your immune system and the outside world, and stress and digestive symptoms often travel together, in both directions.

Research also links the gut with sleep, mood and thinking. The animal evidence is strong. The human evidence is growing, but most of it so far shows association rather than cause and effect.

There is no test that scores how “healthy” your gut-brain axis is. What you can do is look after the things that feed it.

What the research says helps

A shopper picks through fresh vegetables and leafy greens at a market stall

The main habits, and how strong the evidence is behind each:

HabitWhat research showsHow strong
A varied, plant-rich, fibre-rich dietFibre feeds gut bacteria, which produce short-chain fatty acids. Healthy dietary patterns are sensible for overall health.Good for general health. Direct evidence of a mood benefit through the gut is limited.
Mediterranean-style eatingTrials for low mood have been encouraging, though results vary. The microbiome has not been shown to explain the benefit.Promising, not uniform
Fermented foodsA small 2021 Stanford study in Cell found that a fermented-food diet increased microbial diversity and lowered some inflammation markers. It did not test mood.Early
Probiotic supplementsSome trials report modest improvements in mood or anxiety, but results vary widely between products and strains. For irritable bowel syndrome, the American College of Gastroenterology suggests against probiotics for overall symptoms, citing very low certainty evidence.Mixed, and product choice matters
Sleep and stress managementSleep, stress and gut function influence each other.Plausible and consistent, mostly observational
Less ultra-processed foodHigher intake is associated with poorer mental-health outcomes. A gut cause has not been established.Association only
Antibiotics only as prescribedAntibiotics clearly disrupt the gut microbiome, sometimes for a long time. They are essential medicines when needed. Never stop one without your doctor’s advice.Strong on the disruption, uncertain on mood

The basics, which are food variety, sleep, movement and stress, are sensible for your health in general. Claims that a single food, supplement or “gut cleanse” will fix mood go beyond what the evidence shows.

Where good supplementation and probiotics fit

Food comes first, but food alone does not always cover everything. Good nutritional support can play a useful supporting role, most of all where your diet leaves gaps or your report points to a nutrient tendency worth supporting. Probiotics are a more mixed case, because the evidence depends on the strain and the reason for taking them.

  • Quality and choice matter. Supplements and probiotics vary widely in strains, doses and quality, and the research on probiotics is specific to the strain. It helps to have someone who knows your report and goals help you choose.
  • It supports, it does not replace. Nutritional support works alongside food, sleep, movement and stress habits. No product can promise a particular result.
  • It should fit you. Your DNA report shows how your body tends to handle key nutrients such as vitamin B12, folate, vitamin D, magnesium and omega-3 fats. That gives the choice a starting point other than guesswork.

This is what your MyDNA consultant is for. They match nutritional support to your report and your goals, and follow up with you to see how it is going.

Where your DNA comes in

First, what a DNA test does not do. The MyDNA DNA Test reads your human DNA. It does not measure your gut microbiome, which is the community of bacteria living in your digestive system. A microbiome test is a different kind of test.

Two panels: human DNA, which MyDNA reads, and gut bacteria, which this test does not measure

What your DNA does show is the inherited side of the conversation: how your own body is wired to handle food, nutrients, sleep and stress. Genes and gut interact in real ways. A well-known example is lactase persistence. Some people keep producing the enzyme that digests milk sugar into adulthood, and others do not, which affects how they respond to dairy.

Several areas of the MyDNA DNA Test connect to the gut-brain axis.

Digestive tendencies

Irritable bowel syndromeLactose intoleranceCeliac diseaseGluten sensitivityAcid reflux diseaseIndigestionGastritisCrohn’s diseaseUlcerative colitisHelicobacter pylori infection

These show your genetic predisposition. They do not tell you whether you have a condition. Your consultant can talk you through what they mean for your plan. Symptoms that worry you are covered in the doctor section further down.

How your body handles key nutrients

Trp/Phe metabolismVitamin B12 levelVitamin B6 levelFolate levelVitamin D levelMagnesium levelDHA levelEPA level

Tryptophan is the amino acid the brain uses to make serotonin, and B vitamins, folate and omega-3 fats play roles in how nerves and mood systems work. These reports show your genetic tendencies, and they do not show whether low mood or anxiety has a nutritional cause. They are not blood tests, so they point to where your consultant can help you focus your nutritional support, and where a blood test may be worth asking about.

Sleep

Deep sleepSleep latencyInsomniaCircadian rhythm

Sleep and gut function influence each other. Knowing how you are wired for sleep helps you set up habits that suit you.

Stress and resilience

Psychological resilienceEndorphin level

Stress is one of the main ways the brain talks to the gut. Your consultant can talk through what these tendencies mean for how you manage pressure.

Food and lifestyle tendencies

Caffeine metabolismAlcohol metabolismAppetite controlSnacking frequencyDairy consumption frequencySkipping breakfast

Caffeine and alcohol affect both gut comfort and sleep. These reports show how your body tends to handle them, so your plan can fit you.

The reports also include mental health predispositions. These are sensitive, so your consultant goes through them with you in person, and you decide which ones you want to focus on.

From results to a plan

A client sits across a table from a consultant who is writing notes, with fresh vegetables, salmon and a clipboard in front of them

A report on its own is a long document. A good plan is short and specific.

  1. A consultant collects your sample in person, at your home, office or another convenient place in Singapore.
  2. Your results arrive in 10 to 14 days in a secure online account.
  3. Your consultant walks you through the reports that matter to you, starting with what runs in your family.
  4. You leave with a plan for food, sleep, movement and stress that fits how you are wired, with personalised nutritional support, including gut-supporting options, where your report and goals point to it.
  5. A follow-up session lets you check how it is going. The consultation is included with the kit, with no separate fee.

When to see a doctor

For everyday gut and well-being goals, start with your consultant. Some symptoms need a doctor first, because they can have causes that no diet or supplement addresses. If you are not sure which group you are in, see a doctor.

  • blood in your stool, black or tarry stools, or unexplained weight loss
  • persistent vomiting, difficulty swallowing, or a fever with abdominal pain
  • a lasting change in bowel habits, or severe or worsening pain
  • persistent low mood or anxiety

If you are ever thinking of harming yourself, call the Samaritans of Singapore 24-hour hotline on 1767, or 995 in an emergency.

If you are pregnant, have an existing condition, take prescribed medication or have a weakened immune system, speak to your doctor or pharmacist before starting any supplement, and let your consultant know.

Your genetics are a blueprint, not your destiny.

Ready to find out how you are wired?

Explore the MyDNA DNA Test, or talk to a consultant. Helix, our assistant, takes a few details first and then connects you with the team.

Sources: Morais LH, Schreiber HL, Mazmanian SK. The gut microbiota-brain axis in behaviour and brain disorders. Nature Reviews Microbiology, 2021. Dalile B, Van Oudenhove L, Vervliet B, Verbeke K. The role of short-chain fatty acids in microbiota-gut-brain communication. Nature Reviews Gastroenterology and Hepatology, 2019. Wastyk HC et al. Gut-microbiota-targeted diets modulate human immune status. Cell, 2021. Lacy BE et al. ACG Clinical Guideline: Management of Irritable Bowel Syndrome. American Journal of Gastroenterology, 2021. Effect of Mediterranean diet on mental health outcomes: a systematic review. Nutrition Research Reviews.
MyDNA provides direct-to-consumer genetic testing for wellness and informational purposes. It is not a medical diagnostic test and does not replace medical advice, diagnosis, health screening or treatment. Genetic predisposition indicates likelihood, not certainty. Always consult a qualified healthcare professional about your personal health, and before starting any supplement, particularly if you are pregnant, have an existing condition, or take prescribed medication.